My various theories, now that we know more:
The crystals:
We've seen a blue one (reveals weaknesses and how to open/close them)
We've seen a gold one (makes energy solid)
Proletariat may have been exposed to one (Duplication of material)
Finally, we have the green one in the Stuffed Ape- I have a theory that this enhances mental powers. It could be that Visionary is psychic not because of drugs, but because she has been absorbing the energy of the green crystal for her entire life- this would also explain why the Dreamer suddenly became the Dreamer- she recieved the Stuffed Ape and its crystal payload, and the mental-enhancing energies therein. It would also explain why Man-grove became more sentient after receiving the Ape- the crystal began enhancing its mental capability and giving it more of a sense of self and sapience.
Now, choke:
Choke merges with Deadline's artifact, which is powered by a blue crystal. Begins seeing flaws and how to rectify them.
Chokepoint merges with Unity's bots, which contain fragments of Unity's personality.
Chokepoint merges with the Omnitron IV factory. She assimilates the leftover remnants of OX in the process, which gives her insight into the future. This also gives her fragments of Parse's analytical mind (which was opened through exposure to Omnitron fragments + cosmic energy).
Over time, the fragments of Unity/OX/Parse became more integrated with the core Choke personality.
This became CON, and it set about trying to figure out how to avoid the final wasteland scenario.
La capitan (young) came to final wasteland.
The green monkeything took an OX component- which CON used to track her timestream.
Con finds suitable cantidate for timestream repair in Silver gulch.
Punches through to retrieve him, repairs him when rats tear off arm.
Arm contains bits of Choke (to integrate with his biology) and Unity (to reconfigure as needed). Chrono-badge uses OX technology for time travel. Bounty system uses Parse's knowledge ot find weak points that could be altered to prevent final wasteland.
BUT- badge got busted before he could complete everything. Repaired by La capitan (old) using time travel tech.
This gave Chrono a measure of peace, as it would take Choke quite a while to assimilate the new tech. CON is temporarily silenced.
BUT- by the time of Broken city, something has changed. Choke/CON has re-asserted control and begun mechanizing more of Jim.
I wonder- does anyone even remember the Chrono-Ranger? did he do his job so well that memories of his presence were edited out of the timestream?